Pseudomonas syringae pv. tomato DC3000, PSPTO_5604 (atpE)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5604
NCBI Old Locus Tag	PSPTO5604
Name	atpE Synonym: PSPTO5604
Replicon	chromosome
Genomic location	6386310 - 6386567 (- strand)

Cross-References

RefSeq	NP_795322.1
GI	28872703
Entrez	1187296
INSDC	AAO59017.1
NCBI Locus Tag	PSPTO_5604
NCBI Old Locus Tag	PSPTO5604
UniParc	UPI000000972E
UniProtKB Acc	Q87TS9
UniProtKB ID	ATPL_PSESM
UniRef100	UniRef100_Q48BG0
UniRef50	UniRef50_B0TQF9
UniRef90	UniRef90_A6VF37

Product

Feature Type	CDS
Coding Frame	1
Product Name	F0F1 ATP synthase subunit C
Synonyms
Evidence for Translation
Charge (pH 7)	-1.02
Kyte-Doolittle Hydrophobicity Value	1.302
Molecular Weight (kDa)	8.6
Isoelectric Point (pI)	4.59

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 197 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005090 (519 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5604 Search term: atpE Search term: F0F1 ATP synthase subunit C

Human Homologs

References