Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0037 (trpI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0037
Name
trpI
Replicon chromosome
Genomic location 42708 - 43616 (+ strand)

Cross-References

RefSeq YP_272351.1
GI 71734854
Entrez 3557176
INSDC AAZ34618.1
NCBI Locus Tag PSPPH_0037
UniParc UPI0000575036
UniProtKB Acc Q48QG5
UniProtKB ID Q48QG5_PSE14
UniRef100 UniRef100_Q48QG5
UniRef50 UniRef50_P11720
UniRef90 UniRef90_Q48QG5

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator TrpI
Synonyms
Evidence for Translation
Charge (pH 7) -2.12
Kyte-Doolittle Hydrophobicity Value -0.176
Molecular Weight (kDa) 33080.4
Isoelectric Point (pI) 6.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 413 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000037 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0037
Search term: trpI

Human Homologs

References

No references are associated with this feature.