Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2107

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2107
Name
Replicon chromosome
Genomic location 2467532 - 2468386 (- strand)

Cross-References

RefSeq YP_274326.1
GI 71736943
EC Number 1.1.1.25
Entrez 3559332
INSDC AAZ36707.1
NCBI Locus Tag PSPPH_2107
UniParc UPI000057576A
UniProtKB Acc Q48JV1
UniProtKB ID Q48JV1_PSE14
UniRef100 UniRef100_Q48JV1
UniRef50 UniRef50_Q48JV1
UniRef90 UniRef90_Q48JV1

Product

Feature Type CDS
Coding Frame 1
Product Name
shikimate 5-dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -5.99
Kyte-Doolittle Hydrophobicity Value 0.118
Molecular Weight (kDa) 30.2
Isoelectric Point (pI) 5.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 602 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000242 (485 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2107

Human Homologs

References

No references are associated with this feature.