Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_5102

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_5102
Name
Replicon chromosome
Genomic location 5791020 - 5791235 (+ strand)

Cross-References

RefSeq YP_277179.1
GI 71734125
Entrez 3556427
INSDC AAZ33889.1
NCBI Locus Tag PSPPH_5102
UniParc UPI0000394E5B
UniProtKB Acc Q48BR6
UniProtKB ID Q48BR6_PSE14
UniRef100 UniRef100_F3EFP4
UniRef50 UniRef50_Q4KKH0
UniRef90 UniRef90_F3EFP4

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.22
Kyte-Doolittle Hydrophobicity Value -0.380
Molecular Weight (kDa) 8.2
Isoelectric Point (pI) 10.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004997 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_5102

Human Homologs

References

No references are associated with this feature.