Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a17

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a17
Name
Replicon chromosome
Genomic location 22514 - 23302 (+ strand)

Cross-References

RefSeq YP_004351138.1
GI 330806676
Entrez 10468828
INSDC AEA66134.1
NCBI Locus Tag PSEBR_a17
UniParc UPI0002041FA0
UniProtKB Acc F2KAD5
UniProtKB ID F2KAD5_PSEBN
UniRef100 UniRef100_F2KAD5
UniRef50 UniRef50_R4Y1Z9
UniRef90 UniRef90_A0A0A1I3X3

Product

Feature Type CDS
Coding Frame 1
Product Name
short-chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -3.31
Kyte-Doolittle Hydrophobicity Value 0.092
Molecular Weight (kDa) 27.8
Isoelectric Point (pI) 5.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 649 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001279 (409 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a17

Human Homologs

Ensembl 97, assembly GRCh38.p12
dehydrogenase/reductase 2 [Source:HGNC Symbol;Acc:HGNC:18349]
E-value: 2.0e-16
Percent Identity: 28.9

References

No references are associated with this feature.