Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a45

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a45
Name
Replicon chromosome
Genomic location 52363 - 54465 (+ strand)

Cross-References

RefSeq YP_004351168.1
GI 330806706
Entrez 10468858
INSDC AEA66164.1
NCBI Locus Tag PSEBR_a45
UniParc UPI0002041FB9
UniProtKB Acc F2KAG5
UniProtKB ID F2KAG5_PSEBN
UniRef100 UniRef100_F2KAG5
UniRef50 UniRef50_K9NDK5
UniRef90 UniRef90_G8PX58

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase
Synonyms
Evidence for Translation
Charge (pH 7) -36.16
Kyte-Doolittle Hydrophobicity Value -0.412
Molecular Weight (kDa) 76484.6
Isoelectric Point (pI) 4.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 456 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005027 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a45

Human Homologs

References

No references are associated with this feature.