Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1184

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a1184
Name
Replicon	chromosome
Genomic location	1467746 - 1468513 (- strand)

Cross-References

RefSeq	YP_004352367.1
GI	330807905
Entrez	10470079
INSDC	AEA67363.1
NCBI Locus Tag	PSEBR_a1184
UniParc	UPI0002041B41
UniProtKB Acc	F2K8P7
UniProtKB ID	F2K8P7_PSEBN
UniRef100	UniRef100_A0A0D0R193
UniRef50	UniRef50_P21629
UniRef90	UniRef90_Q1IDT3

Product

Feature Type	CDS
Coding Frame	1
Product Name	high-affinity branched amino acid ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	3.38
Kyte-Doolittle Hydrophobicity Value	-0.122
Molecular Weight (kDa)	28.3
Isoelectric Point (pI)	8.68

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001033 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a1184 Search term: high-affinity branched amino acid ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000513710 transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43] E-value: 2.0e-17 Percent Identity: 26.9
Ensembl 110, assembly GRCh38.p14	ENSP00000411096 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 2.0e-17 Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14	ENSP00000396789 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 2.0e-17 Percent Identity: 28.7
Ensembl 110, assembly GRCh38.p14	ENSP00000442634 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 2.0e-17 Percent Identity: 28.7

References