Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5133

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5133
Name
Replicon chromosome
Genomic location 6205162 - 6205833 (- strand)

Cross-References

RefSeq YP_004356588.1
GI 330812126
Entrez 10474358
NCBI Locus Tag PSEBR_a5133

Product

Feature Type CDS
Coding Frame 1
Product Name
nucleotidyl transferase
Synonyms
Evidence for Translation
Charge (pH 7) -6.35
Kyte-Doolittle Hydrophobicity Value -0.054
Molecular Weight (kDa) 24174.3
Isoelectric Point (pI) 5.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 615 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000580 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5133

Human Homologs

Ensembl 110, assembly GRCh38.p14
GDP-mannose pyrophosphorylase B [Source:HGNC Symbol;Acc:HGNC:22932]
E-value: 3.5e-21
Percent Identity: 30.9
Ensembl 110, assembly GRCh38.p14
GDP-mannose pyrophosphorylase B [Source:HGNC Symbol;Acc:HGNC:22932]
E-value: 3.5e-21
Percent Identity: 30.9
Ensembl 110, assembly GRCh38.p14
GDP-mannose pyrophosphorylase B [Source:HGNC Symbol;Acc:HGNC:22932]
E-value: 3.5e-21
Percent Identity: 30.9

References

No references are associated with this feature.