Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5323

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5323
Name
Replicon chromosome
Genomic location 6445514 - 6446104 (+ strand)

Cross-References

RefSeq YP_004356828.1
GI 330812366
Entrez 10474599
INSDC AEA71824.1
NCBI Locus Tag PSEBR_a5323
UniParc UPI0002041874
UniProtKB Acc F2K697
UniProtKB ID F2K697_PSEBN
UniRef100 UniRef100_A0A0D0T3G2
UniRef50 UniRef50_P25254
UniRef90 UniRef90_G8Q3L8

Product

Feature Type CDS
Coding Frame 1
Product Name
membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 5.16
Kyte-Doolittle Hydrophobicity Value 1.188
Molecular Weight (kDa) 21.6
Isoelectric Point (pI) 9.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 277 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000383 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5323
Search term: membrane protein

Human Homologs

References

No references are associated with this feature.