Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5337

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a5337
Name
Replicon	chromosome
Genomic location	6456444 - 6457115 (- strand)

Cross-References

RefSeq	YP_004356843.1
GI	330812381
Entrez	10474614
INSDC	AEA71839.1
NCBI Locus Tag	PSEBR_a5337
UniParc	UPI0002041883
UniProtKB Acc	F2K6B2
UniProtKB ID	F2K6B2_PSEBN
UniRef100	UniRef100_A0A0D0T3I4
UniRef50	UniRef50_A0A085JP85
UniRef90	UniRef90_Q4K4B9

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	8.68
Kyte-Doolittle Hydrophobicity Value	0.001
Molecular Weight (kDa)	24.6
Isoelectric Point (pI)	10.81

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000365 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a5337 Search term: ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000265316 ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47] E-value: 9.5e-19 Percent Identity: 32.2
Ensembl 110, assembly GRCh38.p14	ENSP00000295750 ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47] E-value: 9.5e-19 Percent Identity: 32.2

References