Pseudomonas protegens Pf-5, PFL_0064 (ctaE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0064
Name
ctaE
Replicon chromosome
Genomic location 63288 - 64175 (+ strand)

Cross-References

RefSeq YP_257216.1
GI 70733576
EC Number 1.9.3.1
Entrez 3480663
INSDC AAY95481.1
NCBI Locus Tag PFL_0064
UniParc UPI000054CB9E
UniProtKB Acc Q4KKL7
UniProtKB ID Q4KKL7_PSEF5
UniRef100 UniRef100_Q4KKL7
UniRef50 UniRef50_G8PXA6
UniRef90 UniRef90_Q4KKL7

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c oxidase subunit III
Synonyms
Evidence for Translation
Charge (pH 7) 4.80
Kyte-Doolittle Hydrophobicity Value 0.545
Molecular Weight (kDa) 33258.9
Isoelectric Point (pI) 8.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 414 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000106 (993 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0064
Search term: ctaE

Human Homologs

Ensembl 110, assembly GRCh38.p14
mitochondrially encoded cytochrome c oxidase III [Source:HGNC Symbol;Acc:HGNC:7422]
E-value: 2.8e-42
Percent Identity: 35.7

References

No references are associated with this feature.