Pseudomonas protegens Pf-5, PFL_0745

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0745
Name
Replicon chromosome
Genomic location 870607 - 871110 (+ strand)

Cross-References

RefSeq YP_257882.2
GI 346642718
Entrez 3481329
INSDC AAY96147.2
NCBI Locus Tag PFL_0745
UniParc UPI000219FEC6
UniProtKB Acc Q4KIQ1
UniProtKB ID Q4KIQ1_PSEF5
UniRef100 UniRef100_Q4KIQ1
UniRef50 UniRef50_A6V969
UniRef90 UniRef90_Q4KIQ1

Product

Feature Type CDS
Coding Frame 1
Product Name
OmpA family lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 4.20
Kyte-Doolittle Hydrophobicity Value 0.026
Molecular Weight (kDa) 18033.7
Isoelectric Point (pI) 10.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 427 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001079 (445 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0745

Human Homologs

References

No references are associated with this feature.