Pseudomonas protegens Pf-5, PFL_1020 (algE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1020
Name
algE
Replicon chromosome
Genomic location 1167771 - 1169375 (- strand)

Cross-References

RefSeq YP_258151.1
GI 70728402
Entrez 3477509
INSDC AAY90307.1
NCBI Locus Tag PFL_1020
UniParc UPI000054CF42
UniProtKB Acc Q4KHY2
UniProtKB ID Q4KHY2_PSEF5
UniRef100 UniRef100_Q4KHY2
UniRef50 UniRef50_P18895
UniRef90 UniRef90_Q4KHY2

Product

Feature Type CDS
Coding Frame 1
Product Name
alginate biosynthesis protein AlgE
Synonyms
Evidence for Translation
Charge (pH 7) -4.64
Kyte-Doolittle Hydrophobicity Value -0.672
Molecular Weight (kDa) 59199.0
Isoelectric Point (pI) 6.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002122 (490 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1020
Search term: algE

Human Homologs

References

No references are associated with this feature.