Pseudomonas protegens Pf-5, PFL_1251

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1251
Name
Replicon chromosome
Genomic location 1421566 - 1424214 (- strand)

Cross-References

RefSeq YP_258382.1
GI 70728633
Entrez 3477428
INSDC AAY90538.1
NCBI Locus Tag PFL_1251
UniParc UPI000054D029
UniProtKB Acc Q4KHA1
UniProtKB ID Q4KHA1_PSEF5
UniRef100 UniRef100_Q4KHA1
UniRef50 UniRef50_A0A0B7D7G3
UniRef90 UniRef90_A0A0B7D7G3

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 21.37
Kyte-Doolittle Hydrophobicity Value 0.420
Molecular Weight (kDa) 96681.5
Isoelectric Point (pI) 9.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 192 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000886 (506 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1251

Human Homologs

References

No references are associated with this feature.