Pseudomonas protegens Pf-5, PFL_1638 (fliF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1638
Name
fliF
Replicon chromosome
Genomic location 1840667 - 1842454 (+ strand)

Cross-References

RefSeq YP_258764.1
GI 70729030
Entrez 3477222
INSDC AAY90935.1
NCBI Locus Tag PFL_1638
UniParc UPI000054D1A4
UniProtKB Acc Q4KG69
UniProtKB ID Q4KG69_PSEF5
UniRef100 UniRef100_Q4KG69
UniRef50 UniRef50_Q4KG69
UniRef90 UniRef90_Q4KG69

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar MS-ring protein
Synonyms
Evidence for Translation
Charge (pH 7) -14.25
Kyte-Doolittle Hydrophobicity Value -0.181
Molecular Weight (kDa) 63.3
Isoelectric Point (pI) 4.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 309 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001062 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1638
Search term: fliF

Human Homologs

References

No references are associated with this feature.