Pseudomonas protegens Pf-5, PFL_1681 (ccmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1681
Name
ccmB
Replicon chromosome
Genomic location 1883805 - 1884473 (+ strand)

Cross-References

RefSeq YP_258807.1
GI 70729071
Entrez 3477535
INSDC AAY90976.1
NCBI Locus Tag PFL_1681
UniParc UPI000054D1CE
UniProtKB Acc Q4KG26
UniProtKB ID Q4KG26_PSEF5
UniRef100 UniRef100_Q4KG26
UniRef50 UniRef50_Q9I3N6
UniRef90 UniRef90_Q4KG26

Product

Feature Type CDS
Coding Frame 1
Product Name
heme exporter protein CcmB
Synonyms
Evidence for Translation
Charge (pH 7) 0.40
Kyte-Doolittle Hydrophobicity Value 1.326
Molecular Weight (kDa) 23.0
Isoelectric Point (pI) 7.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 186 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001391 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1681
Search term: ccmB

Human Homologs

References

No references are associated with this feature.