Pseudomonas protegens Pf-5, PFL_1884

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1884
Name
Replicon chromosome
Genomic location 2097679 - 2098629 (+ strand)

Cross-References

RefSeq YP_259003.1
GI 70729266
Entrez 3477633
INSDC AAY91171.1
NCBI Locus Tag PFL_1884
UniParc UPI000054D291
UniProtKB Acc Q4KFI0
UniProtKB ID Q4KFI0_PSEF5
UniRef100 UniRef100_Q4KFI0
UniRef50 UniRef50_Q4KFI0
UniRef90 UniRef90_Q4KFI0

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 7.31
Kyte-Doolittle Hydrophobicity Value -0.054
Molecular Weight (kDa) 34.6
Isoelectric Point (pI) 9.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 509 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000232 (726 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1884

References

No references are associated with this feature.