Pseudomonas protegens Pf-5, PFL_1990

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1990
Name
Replicon chromosome
Genomic location 2218181 - 2218525 (+ strand)

Cross-References

RefSeq YP_259109.1
GI 70729371
Entrez 3478345
INSDC AAY91276.1
NCBI Locus Tag PFL_1990
UniParc UPI000054D2FA
UniProtKB Acc Q4KF74
UniProtKB ID Q4KF74_PSEF5
UniRef100 UniRef100_Q4KF74
UniRef50 UniRef50_A4XZF8
UniRef90 UniRef90_Q4KF74

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.73
Kyte-Doolittle Hydrophobicity Value 0.147
Molecular Weight (kDa) 12594.7
Isoelectric Point (pI) 6.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000596 (324 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1990

Human Homologs

References

No references are associated with this feature.