Pseudomonas protegens Pf-5, PFL_2123

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2123
Name
Replicon chromosome
Genomic location 2344115 - 2344513 (+ strand)

Cross-References

RefSeq YP_259230.1
GI 70729492
Entrez 3478798
INSDC AAY91397.1
NCBI Locus Tag PFL_2123
UniParc UPI000054D36E
UniProtKB Acc Q4KEV3
UniProtKB ID Q4KEV3_PSEF5
UniRef100 UniRef100_Q4KEV3
UniRef50 UniRef50_Q4KEV3
UniRef90 UniRef90_Q4KEV3

Product

Feature Type CDS
Coding Frame 1
Product Name
tail assembly protein K
Synonyms
Evidence for Translation
Charge (pH 7) -1.69
Kyte-Doolittle Hydrophobicity Value -0.437
Molecular Weight (kDa) 15114.1
Isoelectric Point (pI) 6.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 40 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019995 (1 members)
Putative Inparalogs 1 predicted inparalogs
tail assembly protein K (PFL_3749) 86.7% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2123

Human Homologs

References

No references are associated with this feature.