Pseudomonas protegens Pf-5, PFL_2152

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2152
Name
Replicon chromosome
Genomic location 2407236 - 2408744 (- strand)

Cross-References

RefSeq YP_259259.1
GI 70729521
Entrez 3479100
INSDC AAY91426.1
NCBI Locus Tag PFL_2152
UniParc UPI000054D389
UniProtKB Acc Q4KES4
UniProtKB ID Q4KES4_PSEF5
UniRef100 UniRef100_Q4KES4
UniRef50 UniRef50_Q4KES4
UniRef90 UniRef90_Q4KES4

Product

Feature Type CDS
Coding Frame 1
Product Name
radical SAM protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.33
Kyte-Doolittle Hydrophobicity Value -0.207
Molecular Weight (kDa) 54973.2
Isoelectric Point (pI) 7.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 441 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020012 (25 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2152

Human Homologs

References

No references are associated with this feature.