Pseudomonas protegens Pf-5, PFL_2246

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2246
Name
Replicon chromosome
Genomic location 2511110 - 2511754 (- strand)

Cross-References

RefSeq YP_259353.1
GI 70729614
EC Number 3.-.-.-
Entrez 3478841
INSDC AAY91519.1
NCBI Locus Tag PFL_2246
UniParc UPI000054D3E7
UniProtKB Acc Q4KEI0
UniProtKB ID Q4KEI0_PSEF5
UniRef100 UniRef100_Q4KEI0
UniRef50 UniRef50_A0A0B7DDI5
UniRef90 UniRef90_Q4KEI0

Product

Feature Type CDS
Coding Frame 1
Product Name
isochorismatase
Synonyms
Evidence for Translation
Charge (pH 7) -4.20
Kyte-Doolittle Hydrophobicity Value -0.236
Molecular Weight (kDa) 24.0
Isoelectric Point (pI) 6.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 298 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001494 (1079 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2246
Search term: isochorismatase

Human Homologs

References

No references are associated with this feature.