Pseudomonas protegens Pf-5, PFL_2252

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2252
Name
Replicon chromosome
Genomic location 2516431 - 2517210 (+ strand)

Cross-References

RefSeq YP_259359.1
GI 70729620
Entrez 3478847
INSDC AAY91525.1
NCBI Locus Tag PFL_2252
UniParc UPI000054D3ED
UniProtKB Acc Q4KEH4
UniProtKB ID Q4KEH4_PSEF5
UniRef100 UniRef100_Q4KEH4
UniRef50 UniRef50_Q3KEJ9
UniRef90 UniRef90_Q3KEJ9

Product

Feature Type CDS
Coding Frame 1
Product Name
periplasmic arginine/ornithine-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.58
Kyte-Doolittle Hydrophobicity Value -0.230
Molecular Weight (kDa) 28.3
Isoelectric Point (pI) 6.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 445 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000855 (503 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2252

Human Homologs

References

No references are associated with this feature.