Pseudomonas protegens Pf-5, PFL_5174

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5174
Name
Replicon chromosome
Genomic location 5935081 - 5936199 (+ strand)

Cross-References

RefSeq YP_262252.1
GI 70732489
Entrez 3479576
INSDC AAY94394.1
NCBI Locus Tag PFL_5174
UniParc UPI000054DF17
UniProtKB Acc Q4K681
UniProtKB ID POTA_PSEF5
UniRef100 UniRef100_Q4K681
UniRef50 UniRef50_Q9I6T2
UniRef90 UniRef90_Q4K681

Product

Feature Type CDS
Coding Frame 1
Product Name
polyamine ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.92
Kyte-Doolittle Hydrophobicity Value -0.109
Molecular Weight (kDa) 40918.6
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000205 (466 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5174

Human Homologs

Ensembl 97, assembly GRCh38.p12
transporter 2, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:44]
E-value: 5.5e-20
Percent Identity: 31.3

Human Homologs

Ensembl 97, assembly GRCh38.p12
transporter 2, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:44]
E-value: 5.5e-20
Percent Identity: 31.3

Human Homologs

Ensembl 97, assembly GRCh38.p12
transporter 2, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:44]
E-value: 5.5e-20
Percent Identity: 31.3

References

No references are associated with this feature.