Pseudomonas protegens Pf-5, PFL_5613

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5613
Name
Replicon chromosome
Genomic location 6394655 - 6395623 (+ strand)

Cross-References

RefSeq YP_262672.1
GI 70732901
Entrez 3479988
INSDC AAY94806.1
NCBI Locus Tag PFL_5613
UniParc UPI000054E0AE
UniProtKB Acc Q4K511
UniProtKB ID Q4K511_PSEF5
UniRef100 UniRef100_Q4K511
UniRef50 UniRef50_A1KC81
UniRef90 UniRef90_K9NSD5

Product

Feature Type CDS
Coding Frame 1
Product Name
2-nitropropane dioxygenase
Synonyms
Evidence for Translation
Charge (pH 7) -2.98
Kyte-Doolittle Hydrophobicity Value 0.067
Molecular Weight (kDa) 34583.3
Isoelectric Point (pI) 6.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 310 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000639 (470 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5613

Human Homologs

References

No references are associated with this feature.