Pseudomonas protegens Pf-5, PFL_5654

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5654
Name
Replicon chromosome
Genomic location 6440300 - 6441574 (+ strand)

Cross-References

RefSeq YP_262713.1
GI 70732942
Entrez 3480029
INSDC AAY94847.1
NCBI Locus Tag PFL_5654
UniParc UPI000054E0D7
UniProtKB Acc Q4K4X0
UniProtKB ID Y5654_PSEF5
UniRef100 UniRef100_Q4K4X0
UniRef50 UniRef50_P59351
UniRef90 UniRef90_P59351

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.39
Kyte-Doolittle Hydrophobicity Value -0.547
Molecular Weight (kDa) 48.7
Isoelectric Point (pI) 6.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 180 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000570 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5654

Human Homologs

References

No references are associated with this feature.