Pseudomonas protegens Pf-5, PFL_5787

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5787
Name
Replicon chromosome
Genomic location 6594026 - 6595021 (+ strand)

Cross-References

RefSeq YP_262845.2
GI 346643289
Entrez 3480159
INSDC AAY94977.2
NCBI Locus Tag PFL_5787
UniParc UPI00021A009C
UniProtKB Acc Q4K4I8
UniProtKB ID Q4K4I8_PSEF5
UniRef100 UniRef100_Q4K4I8
UniRef50 UniRef50_G8Q2J0
UniRef90 UniRef90_Q4K4I8

Product

Feature Type CDS
Coding Frame 1
Product Name
ArsR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -4.29
Kyte-Doolittle Hydrophobicity Value -0.011
Molecular Weight (kDa) 35.9
Isoelectric Point (pI) 6.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 357 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000531 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5787

Human Homologs

References

No references are associated with this feature.