Pseudomonas poae RE_1-1-14, H045_18600
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest |
| Locus Tag |
H045_18600
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4248435 - 4251452 (- strand) |
Cross-References
| RefSeq | YP_007399278.1 |
| GI | 447918710 |
| Entrez | 14505510 |
| NCBI Locus Tag | H045_18600 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
sarcosine oxidase subunit alpha
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 4.28 |
| Kyte-Doolittle Hydrophobicity Value | -0.183 |
| Molecular Weight (kDa) | 109271.6 |
| Isoelectric Point (pI) | 7.51 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 494 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004972 (512 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H045_18600
Search term: sarcosine oxidase subunit alpha
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
E-value:
1.8e-29
Percent Identity:
26.5
|
References
No references are associated with this feature.