Motif View

Internal ID 17654507
Source Database TransTermHP TERM 1450
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1450
Sequence GCCCGCGCTGGTCAGTCGCGGGC
Look for more occurrences
Start 6700627
End 6700649
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa 2192 supercont1.1 genomic scaffold, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCCGTCATGAAGAA(5' tail) GCCCGCG-CT(5' stem) GGTC(loop) AGTCGCGGGC(3' stem) TTTTTAATGCATGGA(3' tail). Confidence: 100. gap 1, opp_overlap 6700627

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685