Motif View

Internal ID 17654517
Source Database TransTermHP TERM 1463
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1463
Sequence GCGCCAGGCTGCCGCCTGGCGG
Look for more occurrences
Start 6735795
End 6735816
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa 2192 supercont1.1 genomic scaffold, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCAACAGATGTGAG(5' tail) GCGCCAGGC(5' stem) TGCC(loop) GCCTGGCGG(3' stem) TTTTTCTCGTATATT(3' tail). Confidence: 100. overlap 6735796

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685