Motif View

Internal ID 17654810
Source Database TransTermHP TERM 377
Feature Type terminator
Name
Rho-independent transcription terminator TERM 377
Sequence GGGCGGTTTCCACCGCCC
Look for more occurrences
Start 1405047
End 1405064
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGCTGGCGAAAAAA(5' tail) GGGCGGT(5' stem) TTCC(loop) ACCGCCC(3' stem) TTTTTCATGCCCGTC(3' tail). Confidence: 100. opp_overlap 1405047

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685