Motif View

Internal ID 17655635
Source Database TransTermHP TERM 58
Feature Type terminator
Name
Rho-independent transcription terminator TERM 58
Sequence GCAACGCGCCGGCTCCTGCCGGCGCGTTGC
Look for more occurrences
Start 321984
End 322013
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGTCAGCCGCCTCT(5' tail) GCAACGCGCCGGC(5' stem) TCCT(loop) GCCGGCGCGTTGC(3' stem) GTTTCGGCGTCGCCA(3' tail). Confidence: 100. overlap 321983 322009 322012

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685