Motif View

Internal ID 17655637
Source Database TransTermHP TERM 61
Feature Type terminator
Name
Rho-independent transcription terminator TERM 61
Sequence GCCCGCGTCCTCCAGGAGGACGCGGGC
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Start 328688
End 328714
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCGGACAGGAAAAA(5' tail) GCCCGCGTCCTC(5' stem) CTG(loop) GAGGACGCGGGC(3' stem) TTTTTTCATTCATGG(3' tail). Confidence: 100. opp_overlap 328688

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685