Motif View

Internal ID 17655645
Source Database TransTermHP TERM 73
Feature Type terminator
Name
Rho-independent transcription terminator TERM 73
Sequence CGGCCCGCCTCCCGGAAGAGAGGCGGGCCG
Look for more occurrences
Start 360348
End 360377
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCCCTGAATCGAAA(5' tail) CGGCCCGCCTCCC(5' stem) GGAA(loop) GAGAGGCGGGCCG(3' stem) TTTCGCGTTCCGACC(3' tail). Confidence: 100. opp_overlap 360348

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685