Motif View

Internal ID 17655685
Source Database TransTermHP TERM 142
Feature Type terminator
Name
Rho-independent transcription terminator TERM 142
Sequence GGCCCGCGCGAGCGGGCC
Look for more occurrences
Start 676976
End 676993
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTCGAACATTCAACC(5' tail) GGCCCGC(5' stem) GCGA(loop) GCGGGCC(3' stem) TTTTCGTTTGCGGAG(3' tail). Confidence: 100. opp_overlap 676923 676974

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685