Motif View

Internal ID 17655711
Source Database TransTermHP TERM 174
Feature Type terminator
Name
Rho-independent transcription terminator TERM 174
Sequence GCCCCTGGCACTGGTTGGTGTCAGGGGC
Look for more occurrences
Start 785268
End 785295
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCTGAAAACAGAAA(5' tail) GCCCCTGGCACT(5' stem) GGTT(loop) GGTGTCAGGGGC(3' stem) TTTTGCATTGGGATC(3' tail). Confidence: 100. opp_overlap 785268

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685