Motif View

Internal ID 17655723
Source Database TransTermHP TERM 189
Feature Type terminator
Name
Rho-independent transcription terminator TERM 189
Sequence GGGCGCCAGCAGGGTTTATGCTGGCGCCC
Look for more occurrences
Start 845709
End 845737
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGCTCGAATGGAAA(5' tail) GGGCGCCAGCA(5' stem) TAAACCC(loop) TGCTGGCGCCC(3' stem) GAGTGCCAAGGTTGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685