Motif View

Internal ID 17655731
Source Database TransTermHP TERM 201
Feature Type terminator
Name
Rho-independent transcription terminator TERM 201
Sequence GCCCCGTCGGGGACGGGGC
Look for more occurrences
Start 882937
End 882955
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGTCCCACAAAAAA(5' tail) GCCCCGTC(5' stem) GGG(loop) GACGGGGC(3' stem) TTTTCCTTGCATTCG(3' tail). Confidence: 100. opp_overlap 882937

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685