Motif View

Internal ID 17655732
Source Database TransTermHP TERM 204
Feature Type terminator
Name
Rho-independent transcription terminator TERM 204
Sequence CGAAGCCCGGCCCCAGCGCCGGGCTTCG
Look for more occurrences
Start 884411
End 884438
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCCGTGGTCGCCCT(5' tail) CGAAGCCCGGC(5' stem) CCCAGC(loop) GCCGGGCTTCG(3' stem) TCGTTTCCGCCCGCC(3' tail). Confidence: 90. overlap 884408

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685