Motif View

Internal ID 17655734
Source Database TransTermHP TERM 207
Feature Type terminator
Name
Rho-independent transcription terminator TERM 207
Sequence GCCCCTGATTTTCCTAGTGAATTTCAGGGGC
Look for more occurrences
Start 901474
End 901504
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGGGCAAAGAAAAA(5' tail) GCCCCTGAAATTC(5' stem) ACTAG(loop) GAAAATCAGGGGC(3' stem) TTATCTCTTTGCATT(3' tail). Confidence: 100. opp_overlap 901468 901463 901462 901474

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685