Motif View

Internal ID 17655738
Source Database TransTermHP TERM 215
Feature Type terminator
Name
Rho-independent transcription terminator TERM 215
Sequence TCCCACCCCTCGGGGTGGGA
Look for more occurrences
Start 916202
End 916221
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGCCGGCAAGGAAA(5' tail) TCCCACCC(5' stem) CTCG(loop) GGGTGGGA(3' stem) TTTTTCATGGCCGTG(3' tail). Confidence: 100. opp_overlap 916202, overlap 916187

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685