Motif View

Internal ID 17655781
Source Database TransTermHP TERM 282
Feature Type terminator
Name
Rho-independent transcription terminator TERM 282
Sequence GGCCGCGGATGCGGCC
Look for more occurrences
Start 1091990
End 1092005
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATGAAAAATGCAAAA(5' tail) GGCCGC(5' stem) GGAT(loop) GCGGCC(3' stem) TTTTTTTTCGGGGCG(3' tail). Confidence: 100. opp_overlap 1091990 1091985 1091983

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685