Motif View

Internal ID 17655791
Source Database TransTermHP TERM 297
Feature Type terminator
Name
Rho-independent transcription terminator TERM 297
Sequence CGGCCCGTGAGGGCCG
Look for more occurrences
Start 1157902
End 1157917
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCTCGGCATAAAAAA(5' tail) CGGCCC(5' stem) GTGA(loop) GGGCCG(3' stem) TTTTCGTATGCGCTG(3' tail). Confidence: 91. opp_overlap 1157902

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685