Motif View

Internal ID 17655794
Source Database TransTermHP TERM 302
Feature Type terminator
Name
Rho-independent transcription terminator TERM 302
Sequence GGCCGGTGGCGCAAGCCATCGGCC
Look for more occurrences
Start 1182719
End 1182742
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTTTTCTCGAACGA(5' tail) GGCCGGTGGC(5' stem) GCAA(loop) GCCATCGGCC(3' stem) TTTTTTCATGCCCGG(3' tail). Confidence: 100. opp_overlap 1182719

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685