Motif View

Internal ID 17655803
Source Database TransTermHP TERM 325
Feature Type terminator
Name
Rho-independent transcription terminator TERM 325
Sequence CGGGGCGCCCAGGGGCGCCCCG
Look for more occurrences
Start 1269753
End 1269774
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCGGAGAAAGAGGA(5' tail) CGGGGCGCC(5' stem) CCTG(loop) GGCGCCCCG(3' stem) TTGCTCTTAGCGGCC(3' tail). Confidence: 91. opp_overlap 1269753, overlap 1269748

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685