Motif View

Internal ID 17655804
Source Database TransTermHP TERM 326
Feature Type terminator
Name
Rho-independent transcription terminator TERM 326
Sequence CCCGCCCTCGTGGCGGG
Look for more occurrences
Start 1285876
End 1285892
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGCCGCCCTTCGAA(5' tail) CCCGCC(5' stem) CTCGT(loop) GGCGGG(3' stem) TTTTTTTATGCCTCG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685