Motif View

Internal ID 17655812
Source Database TransTermHP TERM 338
Feature Type terminator
Name
Rho-independent transcription terminator TERM 338
Sequence TTAAGTGCAGCTTAA
Look for more occurrences
Start 1355478
End 1355492
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTCGTGCATATGCT(5' tail) TTAAGT(5' stem) GCA(loop) GCTTAA(3' stem) TTTTTTTCATGAAAC(3' tail). Confidence: 91.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685