Motif View

Internal ID 17655822
Source Database TransTermHP TERM 354
Feature Type terminator
Name
Rho-independent transcription terminator TERM 354
Sequence GTCCGCGCCGCGGGC
Look for more occurrences
Start 1463485
End 1463499
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAGCGCCGACCGTTC(5' tail) GTCCGC(5' stem) GCC(loop) GCGGGC(3' stem) TTTTTTCCCCGCCAC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685