Motif View

Internal ID 17656188
Source Database TransTermHP TERM 916
Feature Type terminator
Name
Rho-independent transcription terminator TERM 916
Sequence GGCCCGCAATCAGCGGGCC
Look for more occurrences
Start 4057491
End 4057509
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGCTGATACGCCAA(5' tail) GGCCCGC(5' stem) AATCA(loop) GCGGGCC(3' stem) TTTTCTTTGGCGACG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685