Motif View

Internal ID 17656558
Source Database TransTermHP TERM 1491
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1491
Sequence GAACGCCGGCTATCGCCGGCGTTC
Look for more occurrences
Start 6047325
End 6047348
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGGGCTAGACGCAG(5' tail) GAACGCCGGC(5' stem) TATC(loop) GCCGGCGTTC(3' stem) TTGTTTGCGCGTTCC(3' tail). Confidence: 100. opp_overlap 6047328, overlap 6047322 6047328

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685