Motif View

Internal ID 17656578
Source Database TransTermHP TERM 1524
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1524
Sequence GGCCCCGACACACTCCGGGCC
Look for more occurrences
Start 6224499
End 6224519
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAGCCTCGTGCTCAC(5' tail) GGCCCCGA(5' stem) CACAC(loop) TCCGGGCC(3' stem) TTTTTATCCACAGGA(3' tail). Confidence: 90.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685